@NineLine ping was about 7-10ms. It was a dedicated server running in dedicated (non GUI) mode.
I have used the same server and not had this issue with my aircraft on other maps. It still had the ghost missile issues.
The common factor(so far) in the ones I had issues with, was it was raining, or a map that had rain on it- one was dynamic, one was a static storm. So far, in maps without any rain, I have not had an issue. I am not sure why rain would effect it, and I am not saying it does, but as I said, that's the only common factor I have found so far.